CAZy
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Description | carbohydrate-active enzymes database |
Contact | |
Research center | AFMB, French National Centre for Scientific Research |
Laboratory | Glycogenomics group |
Primary citation | Lombard & al. (2014)[1] |
Access | |
Website | http://www.cazy.org/ |
Tools | |
Web | http://research.ahv.dk/cazy
http://mothra.ornl.gov/cgi-bin/cat/cat.cgi http://csbl.bmb.uga.edu/dbCAN/ |
CAZy is a database of Carbohydrate-Active enZYmes (CAZymes).[1][2] The database contains a classification and associated information about enzymes involved in the synthesis, metabolism, and transport of carbohydrates. Included in the database are glycoside hydrolases, glycosyltransferases, polysaccharide lyases, carbohydrate esterase and carbohydrate-binding families.
CAZy was established in 1999 in order to provide online and constantly updated access to the family classification of CAZymes.[1] New genomes are added shortly after they appear in the daily releases of GenBank.[3] As of November 2013, CAZy contains sequence information on nearly 340,000 CAZymes.[1]
The CAZy database is coupled with the CAZypedia online encyclopedia, which was launched in June 2009 and intended to be a wiki-based encyclopedia of CAZymes.[4][5] As of 2014, CAZy is developed by the Glycogenomics group at AFMB, a research centre affiliated with the French National Centre for Scientific Research and Aix-Marseille University.[6][7]
Classification
CAZy identifies evolutionary related families of glycosyl hydrolases using the classification introduced by Bernard Henrissat.[8][9] As of 2012 CAZy contains 131 families of glycosyl hydrolase families. These families are given a number to identify them, so for example Glycosyl hydrolase family 1 contains enzymes that possess a TIM barrel fold. These families are clustered into 14 different clans that share structural similarity. CAZy contains 94 families of Glycosyl transferase enzymes,[10] 22 families of polysaccharide lysases[11] and 16 families of carbohydrate esterases.
References
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External links
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